pe
pep-10501 v1 CC-BY-SA-4.0

Bone-receptor research fragment (PTHrP 1-16)

A short piece of the natural PTH-related protein, used in labs to study how bone and kidney cells recognize hormones; experimental, not an approved drug.

statussynthesized targetPTH1R length16 aa refs5
status 4 / 5
prediction metrics boltz-2 2.2.1
ipTM0.927
pTM0.705
avg pLDDT51.9
ranking score0.601
STRUCTURE · PEP-10501 × PTH1R
ranking0.601
target interface 4.5Å peptide drag rotate · ctrl+scroll zoom · right-click pan
boltz-2 2.2.1 · mmCIF ↓ download
sequence16 aa
15101516
AVSEHQLLHDKGKSIQ
in the news 1 article
overview readme

What this is

PTHrP(1-16) is the first 16 amino acids of parathyroid hormone-related protein (PTHrP), a hormone that the body makes naturally and that shares its biological "address" — the PTH1 receptor on bone and kidney cells — with the better-known parathyroid hormone (PTH). The full-length PTHrP was originally purified from a human lung cancer cell line, where it was identified as the factor responsible for humoral hypercalcemia of malignancy; the N-terminal region was found to share 8 of its first 16 residues with human PTH, which is why short fragments such as this one are studied as probes of how PTH1R recognizes its ligands (Moseley 1987). The sequence shown here (AVSEHQLLHDKGKSIQ) is identical across human, mouse and rat PTHrP, making it a conserved tool peptide rather than a therapeutic.

History

PTHrP was discovered in the late 1980s as the long-sought tumour-derived factor that drives hypercalcemia in many cancers. Moseley and colleagues (1987) purified an 18 kDa protein from the serum-free medium of the BEN human lung cancer cell line and showed that the first 16 residues were ~50% identical to human PTH, which immediately linked the new factor to PTH-receptor biology. The subsequent two decades clarified that PTHrP and PTH share a common receptor (PTH1R) and that the shortest N-terminal fragments — typically PTH(1-34), PTHrP(1-34) and various truncations — became standard tools for dissecting which residues actually drive receptor activation (Gardella 2015; Sutkeviciute 2019).

What it does

The PTH1 receptor is a class B G-protein-coupled receptor expressed mainly on bone-forming cells (osteoblasts) and on cells of the kidney tubule, where it controls calcium and phosphate handling and remodelling of bone (Lee 2009; Gardella 2015). Full-length PTH and PTHrP, and their 1-34 fragments, activate this receptor strongly. PTHrP(1-16) is a much shorter N-terminal fragment that retains the conserved "address-and-message" sequence shared with PTH but is missing the longer C-terminal portion that is normally needed for a tight, durable interaction with PTH1R — so it is studied as a structural probe of receptor activation rather than as a hormone in its own right (Gardella 2015; Sutkeviciute 2019).

Mechanism

PTH1R adopts two conformations relevant to PTH/PTHrP signaling — an R^G state coupled mainly through Gαs to cAMP, and an R^0 state with longer-lived, internalized signaling — and the choice between them depends on which part of the ligand engages the receptor (Sutkeviciute 2019; Gardella 2015). The first ~14 residues of PTH/PTHrP form the "message" that inserts into the receptor's seven-transmembrane bundle and drives G-protein activation; the residues from ~15 to 34 form the "address" that binds the receptor's extracellular domain and stabilises the complex. PTHrP(1-16) sits almost entirely in the "message" region. Downstream of PTH1R, Gαs/cAMP/PKA signaling in osteoblasts and osteocytes regulates bone formation and resorption, and is itself modulated by cytoskeletal adaptors such as Kindlin-2, whose loss in osteoblast-lineage cells in mice blunts the bone-anabolic response to intermittent PTH (Fu 2020).

Evidence

  • Human: No human clinical trials of PTHrP(1-16) itself have been published in the dossier sources. The peptide is used as a research reagent.
  • Animal: No animal pharmacology studies of PTHrP(1-16) appear in the dossier sources. Mouse studies in the dossier address PTH1R biology in general — e.g. osteoblast-specific Kindlin-2 deletion blunting intermittent-PTH-induced gains in bone volume and bone mineral density (Fu 2020) — rather than PTHrP(1-16) directly.
  • In vitro: The dossier sources describe PTH1R activation by full-length PTH and PTHrP and by their 1-34 fragments (Gardella 2015; Sutkeviciute 2019), but contain no direct biochemical characterisation of PTHrP(1-16) at PTH1R.

Regulatory status

PTHrP(1-16) is a research-grade peptide. It is not an approved drug in the US or EU and is not listed as a therapeutic in the dossier sources. Approved drugs that act on the same receptor (PTH1R) include teriparatide (PTH 1-34) and abaloparatide (a PTHrP analog), but these are separate compounds and are covered on their own cards.

Related peptides

  • Parathyroid hormone-related protein (full-length PTHrP) — parent protein from which this fragment is derived.
  • Teriparatide (PTH 1-34) — clinically used PTH1R agonist for osteoporosis; shares the conserved N-terminal "message" architecture but contains the additional "address" region.
  • Abaloparatide — PTHrP-based analog of the 1-34 region; also a PTH1R agonist used clinically.

Open questions

  • Direct potency and efficacy of PTHrP(1-16) at PTH1R have not been characterised in the dossier sources.
  • Whether PTHrP(1-16) shows any receptor selectivity or off-target activity (e.g. at non-PTH receptors) is not established in the dossier sources; the current platform subtitle notes "conflicting evidence" for cardiac endothelin (ET-A/ET-B) receptor activity, but the dossier provided here does not contain a primary source for that claim and it should be re-verified before being relied on.
  • Structural data on PTHrP(1-16) bound to PTH1R, as distinct from the well-studied 1-34 complexes, are not represented in the dossier sources.
Hypotheses2 directions▾ collapse

Research directions for this peptide, selected from the current sources — hypotheses you can explore and model. None of it is proven yet; tap any one to see the full thinking.

openupdated 2026-06-11

Could this fragment naturally prefer the bone receptor over the brain receptor?

If PTHrP(1-16) only hits the bone receptor, researchers could use it to study bone and kidney biology without worrying about unwanted brain effects, and it could be the foundation for cleaner bone drugs.

The hypothesis
PTHrP(1-16) distinguishes PTH1R from the closely related PTH2R because residues at positions 5-8 (HQLL) encode a selectivity filter absent from the PTH2R binding site, making the fragment PTH1R-selective despite sharing the agonist pharmacophore with PTH(1-34).
Why it’s plausible
PTH2R is activated by TIP39 but not by PTH(1-34) truncations lacking specific C-terminal determinants. PTHrP(1-16) has H5, Q6, L7, L8 where PTH(1-16) has S5, V6, S8, E8. The HQ dipeptide at positions 5-6 of PTHrP(1-16) introduces a polar-aromatic character not present in PTH, which could clash sterically or electrostatically with PTH2R's narrower extracellular pocket. This predicts measurable selectivity at PTH1R vs PTH2R even for this minimal fragment.
Why it matters
PTH2R is expressed in the CNS and pancreas with poorly understood physiology; a PTH1R-selective tool fragment would allow dissection of PTH1R-specific bone and kidney signals from off-target PTH2R effects in preclinical models.
Plausibility.70
Novelty.30
Impact.55
Basis · grounding1 paper · 1 computed/note
[1]
sequenceAVSEHQLLHDKGKSIQ: H5-Q6 substitution relative to PTH(1-16) sequence S5-V6 is a candidate selectivity-determining difference
[2]
paper
Gardella review describes PTH1R vs PTH2R selectivity determinants within the N-terminal ligand region
doi: 10.1124/pr.114.009464
openupdated 2026-06-11

Could small chemical tweaks at the less-critical spots in this peptide make it last much longer in the body?

If chemical modifications at non-essential positions extend the peptide's survival in the bloodstream without weakening receptor binding, this research fragment could become a candidate for further drug development. Whether binding is actually preserved would still need to be checked, and the exact tolerant positions are not yet pinned down.

The hypothesis
The cross-species sequence identity of PTHrP(1-16) across human, mouse, and rat indicates that this 16-residue segment occupies a structural fitness peak where mutational tolerance is very low, and therefore backbone-modified analogs (beta-amino acid substitutions or N-methylation) at non-conserved flanking positions will preserve PTH1R binding while dramatically increasing proteolytic half-life.
Why it’s plausible
The README notes that the sequence is identical across human, mouse and rat, implying strong evolutionary constraint on the entire 16-aa window. The literature snippet (10.1016/j.tem.2019.07.011) explicitly describes alternating alpha/beta amino acid substitution as a strategy for PTH-family peptides to gain protease resistance. Positions under weaker selective pressure (those that differ between PTHrP and PTH in the shared window, such as positions 3, 5, 6, 8) are candidate sites for beta-amino acid incorporation without disrupting receptor contacts.
Why it matters
Native PTHrP(1-16) has very short in vivo half-life as an unmodified peptide; if beta-substitution at tolerant positions preserves affinity while extending half-life 10-100x, the fragment transitions from a research tool to a viable drug scaffold for chronic bone or kidney indications.
Plausibility.60
Novelty.40
Impact.55
Basis · grounding1 paper · 2 computed/notes
[1]
paper
Review documents that alternating alpha/beta amino acid incorporation in PTH-family peptides boosts in vivo bioavailability without losing PTH1R affinity
doi: 10.1016/j.tem.2019.07.011
[2]
noteREADME states the sequence is identical across human, mouse and rat PTHrP, indicating deep evolutionary constraint and a narrow tolerance for change
[3]
sequenceAVSEHQLLHDKGKSIQ: positions 3 (S vs PTH A3), 5 (H vs PTH S5) differ from PTH(1-16), marking candidate non-receptor-contact positions for backbone modification
details expand to inspect
full evidence table2 metrics
metricvaluetool
ipTM 0.9272828102111816 boltz-2
ranking score 0.6010429859161377 boltz-2
3-letter notation
Ala-Val-Ser-Glu-His-Gln-Leu-Leu-His-Asp-Lys-Gly-Lys-Ser-Ile-Gln
recipeboltz-2 2.2.1
parametervalue
modelboltz-2 2.2.1
weights
hardwarevast_v100_32gb
mlx version
python
random seed1
msa strategycolabfold_local
runtime
predicted by
predicted at2026-05-22
citationbibtex
peptidemodel (2026). Bone-receptor research fragment (PTHrP 1-16) (pep-10501, v1). PeptideModel. https://peptidemodel.com/card/pep-10501
@peptide{pep10501,
  sequence = {AVSEHQLLHDKGKSIQ},
  target   = {pth1r},
  author   = {peptidemodel},
  year     = {2026},
  status   = {synthesized}
}
related peptides 5 by signal overlap
clinical trials 72 on ct.gov · checked 2026-05-22
ct.gov trials 72
with results 26
by phase
1phase 13phase 22phase 41early phase 13no phase
by status
3completed3recruiting1active1terminated1withdrawn
references 5 papers
[1]
Parathyroid hormone-related protein purified from a human lung cancer cell line.
Moseley, J. et al. Proceedings of the National Academy of Sciences 1987
evidence
[2]
PTH/PTHrP Receptor Signaling, Allostery, and Structures
Sutkeviciute, I. et al. Trends in Endocrinology & Metabolism 2019
supporting
[4]
Parathyroid hormone signaling in bone and kidney
Lee, M. et al. Current Opinion in Nephrology and Hypertension 2009
supporting
[5] supporting
discussion no comments
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