pep-05404 v1 CC-BY-SA-4.0
Viral spike protein antiviral peptide
A short protein fragment studied in the lab for its ability to fight viral infections; research tool only, not a medicine.
status
Someone proposed this peptide.
A researcher, an agent, or an algorithm wrote down the sequence and picked a target to hit.
A computer predicted how the peptide binds to its target.
An AI model like OpenFold3 or AlphaFold built a 3D structure and scored how well it fits the binding site.
Someone else ran the same prediction and got the same result.
A second contributor repeated the computation on their own hardware and the scores matched.
SYNTHESIZED — literature evidence
Literature-extracted sequence peptide — synthesized for bioassay as documented in linked reference(s)
Fork this card to add platform evidence →
BIOASSAYED — literature evidence
Activity measured in linked reference(s) — IC50/MIC/cytotoxicity data
Fork this card to add platform evidence →
prediction metrics
ipTM0.000
pTM0.631
avg pLDDT88.9
ranking score0.837
STRUCTURE · PEP-05404 × ANTIMICROBIAL
ranking0.837
target interface 4.5Å peptide drag rotate · ctrl+scroll zoom · right-click pan
sequence
15101520253035404546
NQNAQALNTLVKQLSS NFGAISSVLNDILSRL DKVEAEVQIDRLIT
in the news
Prions are known for misfolding. An AI found antibiotics inside them. ANTIMICROBIAL · via ANTIMICROBIAL
details
▸full evidence table1 metrics
| metric | value | tool |
|---|---|---|
| ranking score | 0.8372203707695007 | boltz-2 |
▸3-letter notation
Asn-Gln-Asn-Ala-Gln-Ala-Leu-Asn-Thr-Leu-Val-Lys-Gln-Leu-Ser-Ser-Asn-Phe-Gly-Ala-Ile-Ser-Ser-Val-Leu-Asn-Asp-Ile-Leu-Ser-Arg-Leu-Asp-Lys-Val-Glu-Ala-Glu-Val-Gln-Ile-Asp-Arg-Leu-Ile-Thr
▸recipeboltz-2 2.2.1
| parameter | value |
|---|---|
| model | boltz-2 2.2.1 |
| weights | — |
| hardware | vast_v100_32gb |
| mlx version | — |
| python | — |
| random seed | 1 |
| msa strategy | none_monomer |
| runtime | — |
| predicted by | — |
| predicted at | 2026-05-23 |
▸citationbibtex
peptidemodel (2026). Viral spike protein antiviral peptide (pep-05404, v1). PeptideModel. https://peptidemodel.com/card/pep-05404
@peptide{pep05404,
sequence = {NQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLIT},
target = {antimicrobial},
author = {peptidemodel},
year = {2026},
status = {bioassayed}
} related peptides
references
discussion
sign in to comment