pe
pep-10564 v1 CC-BY-SA-4.0

Pain-and-seizure-calming brain peptide (Galanin-29 [isoD18])

A lab-made modified form of galanin, a natural nerve-calming peptide, studied for its ability to reduce nerve pain and seizure activity in the brain and spinal cord. Research tool, not an approved drug.

statussynthesized targetGALR1 length29 aa refs6
status 4 / 5
prediction metrics boltz-2 2.2.1
ipTM0.880
pTM0.900
avg pLDDT76.3
ranking score0.787
STRUCTURE · PEP-10564 × GALR1
ranking0.787
target interface 4.5Å peptide drag rotate · ctrl+scroll zoom · right-click pan
boltz-2 2.2.1 · mmCIF ↓ download
sequence29 aa
151015202529
GWTLNSAGYLLGPHA IDNHRSFNDKHGLA
overview readme

What this is

Galanin-29 [isoD18] is a chemically modified form of galanin, a 29-residue neuropeptide found naturally in the nervous systems of most mammals (humans carry a slightly longer 30-residue version). The "[isoD18]" notation marks a specific structural change: the aspartate at position 18 has undergone spontaneous rearrangement to isoaspartate — a β-aspartyl linkage in which the peptide backbone shifts one carbon, subtly altering the peptide's geometry at that residue. Norberg and colleagues (2004) first isolated and characterized exactly this class of β-aspartyl-shifted galanin variants from porcine upper intestine using tandem mass spectrometry. This card represents a synthesized form of that naturally occurring variant, anchored to the rat/porcine 29-residue backbone and targeting galanin receptor type 1 (GALR1).

History

Galanin itself was isolated from porcine intestinal extracts by Viktor Mutt's group at the Karolinska Institute, with its structure published in 1983 in FEBS Letters — the name a contraction of its N-terminal glycine and C-terminal alanine. The cDNA was cloned from rat anterior pituitary in 1987, and three receptor subtypes (GALR1, GALR2, GALR3) were identified and cloned between 1993 and 1998 (Wang and colleagues 1997; Smith and colleagues 1998; Bloomquist and colleagues 1998). The existence of naturally occurring post-translationally modified galanin variants — including β-aspartyl-shifted (isoD) forms — was established by Norberg and colleagues (2004), who isolated five such variants from porcine upper intestine. More recently, Okyem and colleagues (2025, Communications Chemistry) demonstrated that roughly 20% of mature galanin in rat hypothalamus carries the L-isoaspartate modification, that aspartate spontaneously isomerizes to isoaspartate under mildly acidic conditions within 48 hours in vitro, and that the isoAsp form significantly promotes fibril formation compared to unmodified galanin — establishing the isoD variant as a biologically meaningful species, not merely a chemical curiosity.

What it does

Galanin acts broadly as an inhibitory neuromodulator. In the brain, it suppresses neuronal firing in the hippocampus, hypothalamus, and amygdala; in the spinal cord, it modulates pain signals arriving from the periphery. GALR1, the primary target of this peptide, is the receptor subtype most responsible for galanin's inhibitory and anticonvulsant effects: mice lacking the GALR1 gene develop spontaneous seizures, and selective GALR1 activation in the spinal cord suppresses mechanical allodynia in nerve-injured animals (Webling and colleagues 2012; Liu and colleagues 2001). The isoD18 modification does not abolish receptor binding — the N-terminal 16 residues, conserved in this variant, carry the main binding pharmacophore — but the backbone perturbation at position 18 in the C-terminal half alters the peptide's conformational and aggregation properties, as documented by Norberg and colleagues (2004) and Okyem and colleagues (2025).

Evidence

  • Human: No clinical trials of galanin-29 [isoD18] specifically. The parent peptide galanin has been the subject of preclinical drug-discovery programs targeting GALR1 for epilepsy and neuropathic pain, with no approved therapeutic to date (Freimann and colleagues 2015).
  • Animal: The galanin GALR1 axis has been extensively studied in rodent models. Intrathecal galanin suppresses allodynia in nerve-injured rats through GALR1 (Webling and colleagues 2012). GalR1-knockout mice exhibit spontaneous epilepsy, underscoring the receptor's role in seizure suppression.
  • In vitro: Norberg and colleagues (2004) confirmed the β-aspartyl structure of isoD-shifted galanin variants using radioimmunoassay, chromatographic separation, and tandem mass spectrometry. Okyem and colleagues (2025) demonstrated that isoAsp-containing galanin significantly promotes fibril formation relative to unmodified galanin.

Known effects

  • Neuronal inhibition (hippocampus, amygdala, spinal cord) — Established for parent galanin via GALR1; preclinical
  • Anticonvulsant activity — Mediated by GALR1; extensively documented in rodent seizure models; preclinical
  • Suppression of neuropathic pain (allodynia) — GALR1-dependent; shown by intrathecal administration in nerve-injured rats; preclinical
  • Enhanced fibril formation — Specific to isoAsp-containing galanin; demonstrated in vitro (Okyem and colleagues 2025)
  • Spontaneous isoD modification — Occurs in vivo; ~20% of galanin in rat hypothalamus carries this modification (Okyem and colleagues 2025)

Safety signals

No safety data specific to galanin-29 [isoD18] are available in the published literature. The parent peptide galanin has a well-characterized inhibitory profile in the central nervous system, and its broad inhibitory effects on appetite, memory encoding, and neuroendocrine secretion (reviewed by Webling and colleagues 2012) represent areas of pharmacological concern for any GALR1-active analog. The enhanced fibril-forming propensity of the isoD variant, relative to unmodified galanin, is a potential aggregation liability noted by Okyem and colleagues (2025).

Mechanism

GALR1 is a class A GPCR that couples selectively to the inhibitory Gαi/αo pathway. Activation inhibits adenylate cyclase, lowers intracellular cAMP, and opens inwardly rectifying potassium (GIRK) channels — collectively hyperpolarizing the neuron and suppressing firing (Webling and colleagues 2012). The receptor is expressed throughout the central and peripheral nervous system, with particularly high density in hippocampus, hypothalamus, amygdala, brainstem, spinal dorsal horn, and dorsal root ganglia. The N-terminal region of galanin (residues 1–16) is the primary pharmacophore for all three receptor subtypes; truncation beyond two N-terminal residues abolishes receptor affinity (Webling and colleagues 2012; Jiang and Zheng 2022). The [isoD18] modification falls in the C-terminal half of the peptide, which contributes less to receptor binding than to proteolytic stability — the C-terminal segment is thought to act as a shield against exopeptidases (Webling and colleagues 2012). The isoaspartate linkage introduces a one-carbon backbone extension at residue 18, altering local conformation and charge distribution without disrupting the N-terminal pharmacophore.

Regulatory status

  • US: Not approved. Research use only. No IND or clinical trial registration identified for galanin-29 [isoD18].
  • EU: Not approved. Research use only.
  • WADA: Not listed on the current Prohibited List as a named substance; would fall under S0 (non-approved substances) if administered to competitive athletes.

Related peptides

Galanin-29 [isoD18] is a post-translationally modified form of native rat/porcine galanin. Other members of the broader galanin family include galanin-like peptide (GALP) and alarin (a splice variant of GALP); these share the conserved N-terminal pharmacophore but differ in receptor selectivity. Spexin, a more distantly related peptide, selectively activates GALR2 and GALR3 but not GALR1 due to structural clashes with GALR1's binding pocket.

Hypotheses3 directions▾ collapse

Research directions for this peptide, selected from the current sources — hypotheses you can explore and model. None of it is proven yet; tap any one to see the full thinking.

openupdated 2026-06-11

Could the isoD18 modification make this galanin stay bound to its target receptor longer than the unmodified version?

If confirmed, this natural modification could help explain longer-lasting pain relief or seizure suppression. It would also suggest a simple chemical trick for making other brain-targeting peptides last longer without larger doses.

The hypothesis
The isoD18 modification in galanin-29 [isoD18] creates a conformational constraint that stabilises the bioactive GALR1-bound conformation, increasing receptor residence time relative to native galanin despite identical primary pharmacophore residues.
Why it’s plausible
IsoAsp (beta-aspartyl linkage) introduces a one-carbon extension of the backbone, which can act as a local conformational constraint or mimic a beta-turn. If residues flanking position 18 (H14, A15, I16, D17, N18, H19, R20) adopt a receptor-favored turn in the GALR1-bound state, locking that turn via isoD would slow off-rate. The pLDDT of 76.3 across the full peptide suggests moderate local flexibility elsewhere, meaning the constraint at 18 is a specific stabilizing feature rather than global rigidification.
Why it matters
Longer receptor residence time translates to prolonged analgesia and anticonvulsant effect per dose; understanding whether this naturally occurring modification mechanistically achieves that would justify isoD substitutions as a general tool in neuropeptide drug optimization.
Plausibility.55
Novelty.80
Impact.75
Basis · grounding1 paper · 2 computed/notes
[1]
structurepLDDT=76.3 indicates moderate overall flexibility; the isoD at position 18 introduces a specific backbone extension that could locally constrain a turn
[2]
sequenceSequence GWTLNSAGYLLGPHAIDNHRSFNDKHGLA: position 18 (N in standard numbering by the card name isoD18) is flanked by charged/polar residues H14, H19, R20 consistent with a structured turn region
[3]
paper
Norberg 2004 isolated naturally occurring isoD galanin variants from porcine intestine, establishing that these backbone-modified forms arise in vivo and are stable enough to be characterised by tandem MS
doi: 10.1002/rcm.1522
openupdated 2026-06-11

Is galanin-29 [isoD18] harder for the body to degrade than normal galanin?

If true, this natural variant could stay active longer in the body, meaning lower doses could achieve the same effect. That matters for anyone developing galanin-based treatments for epilepsy or chronic pain, where sustained action is essential.

The hypothesis
Galanin-29 [isoD18] is resistant to aspartyl-specific proteases and endopeptidases that cleave or deamidate at D/N-containing motifs, because the isoD18 beta-aspartyl linkage is not recognised as a substrate by the canonical peptidases targeting galanin in the gut and CNS.
Why it’s plausible
Native galanin is degraded rapidly by post-proline endopeptidases and neutral endopeptidases; aspartyl residues also mark sites for asparaginyl endopeptidases and deamidation-driven cleavage. The beta-aspartyl backbone shift at position 18 presents a non-standard amide geometry that most proteases cannot accommodate in their active sites, potentially doubling or tripling half-life in intestinal or CSF milieu. This would explain why such isoD variants accumulate to detectable levels in porcine intestine.
Why it matters
If the modification is a natural protease-resistance mechanism, it provides a biochemical rationale for why these variants exist in vivo and suggests engineered isoD substitutions as a route to longer-acting galanin-based therapeutics without adding synthetic PEG or D-amino-acid bulges.
Plausibility.60
Novelty.55
Impact.70
Basis · grounding1 paper · 1 computed/note
[1]
paper
IsoD galanin variants were isolated from porcine intestinal tissue at detectable abundance, suggesting in vivo accumulation consistent with reduced proteolytic turnover
doi: 10.1002/rcm.1522
[2]
sequencePosition 18 in GWTLNSAGYLLGPHAIDNHRSFNDKHGLA sits adjacent to the SFND motif (positions 22-25); the D17 and isoD18 region is a plausible protease recognition site whose modification could block cleavage
openupdated 2026-06-11

Does the isoD18 modification affect how strongly galanin binds GALR1, or only how well it activates it after binding?

Telling binding apart from activation could allow chemists to design galanin variants that bind without fully activating the receptor, a strategy used to create safer drugs. This matters for developing treatments where partial activation of GALR1 is the desired goal.

The hypothesis
The strong GALR1 ipTM of 0.88 reflects contacts primarily mediated by the N-terminal GWTLNSAGYLLG segment, and the isoD18 modification in the C-terminal half does not disrupt the binding pharmacophore but may fine-tune allosteric coupling to G-protein activation.
Why it’s plausible
Galanin receptor pharmacophore studies (DOI 10.1074/jbc.272.51.31949) demonstrate that different receptor subtypes respond to distinct regions of the galanin sequence. The N-terminal 1-13 residues (GWTLNSAGYLLG) include the conserved WTL motif critical for GALR activity. If GALR1 binding depends primarily on this N-terminal pharmacophore, isoD18 would be a structural passenger for binding affinity but could still alter transmembrane domain coupling by changing the C-terminal segment geometry reaching the extracellular loops.
Why it matters
Establishing which half of galanin drives GALR1 binding versus G-protein coupling efficiency is foundational for designing truncated or biased agonists, and knowing that isoD18 sits outside the binding pharmacophore would clarify that the modification acts on efficacy rather than potency.
Plausibility.60
Novelty.45
Impact.65
Basis · grounding1 paper · 2 computed/notes
[1]
structureipTM=0.88 for the full 29-mer/GALR1 complex; the high confidence suggests the structure prediction converged on a dominant binding mode
[2]
paper
Identifies three distinct pharmacophores across GALR1/2/3, with N-terminal residues critical for GALR1 activity
doi: 10.1074/jbc.272.51.31949
[3]
sequenceN-terminal GWTLNSAGYLLG (residues 1-12) precedes the isoD18 site; the W at position 2 and the YLLG motif are conserved activity determinants in all known galanin orthologs
details expand to inspect
full evidence table2 metrics
metricvaluetool
ipTM 0.8799862265586853 boltz-2
ranking score 0.7867307066917419 boltz-2
3-letter notation
Gly-Trp-Thr-Leu-Asn-Ser-Ala-Gly-Tyr-Leu-Leu-Gly-Pro-His-Ala-Ile-Asp-Asn-His-Arg-Ser-Phe-Asn-Asp-Lys-His-Gly-Leu-Ala
recipeboltz-2 2.2.1
parametervalue
modelboltz-2 2.2.1
weights
hardwarevast_v100_32gb
mlx version
python
random seed1
msa strategycolabfold_local
runtime
predicted by
predicted at2026-05-22
citationbibtex
peptidemodel (2026). Pain-and-seizure-calming brain peptide (Galanin-29 [isoD18]) (pep-10564, v1). PeptideModel. https://peptidemodel.com/card/pep-10564
@peptide{pep10564,
  sequence = {GWTLNSAGYLLGPHAIDNHRSFNDKHGLA},
  target   = {galr1},
  author   = {peptidemodel},
  year     = {2026},
  status   = {synthesized}
}
related peptides 5 by signal overlap
clinical trials 0 trials · checked 2026-05-09
0
no registered clinical trials as of 2026-05-09; we'll re-check periodically
references 6 papers
[1]
Identification of variant forms of the neuroendocrine peptide galanin
Norberg, Å. et al. Rapid Communications in Mass Spectrometry 2004
evidence
[2] supporting
[3]
Galanin Receptors and Ligands
Webling, K. et al. Frontiers in Endocrinology 2012
supporting
[4]
Cloned Human and Rat Galanin GALR3 Receptors
Smith, K. et al. Journal of Biological Chemistry 1998
supporting
[5]
Galanin receptors as a potential target for neurological disease
Freimann, K. et al. Expert Opinion on Therapeutic Targets 2015
supporting
[6]
Cloning and Expression of the Human Galanin Receptor GalR2
Bloomquist, B. et al. Biochemical and Biophysical Research Communications 1998
supporting
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